Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.32□□□□□ -0.12
LCMT2O60294 AC104989.1-201ENST00000519711 778 ntBASIC14.32□□□□□ -0.12
LCMT2O60294 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.32□□□□□ -0.12
LCMT2O60294 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.32□□□□□ -0.12
LCMT2O60294 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 OR10B1P-201ENST00000601666 907 ntBASIC14.32□□□□□ -0.12
LCMT2O60294 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
LCMT2O60294 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 AC009093.2-202ENST00000620513 2079 ntBASIC14.32□□□□□ -0.12
LCMT2O60294 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LCMT2O60294 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
LCMT2O60294 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.31□□□□□ -0.12
LCMT2O60294 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LCMT2O60294 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.31□□□□□ -0.12
LCMT2O60294 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 OR8S1-201ENST00000310194 1080 ntBASIC14.31□□□□□ -0.12
LCMT2O60294 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.31□□□□□ -0.12
LCMT2O60294 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.31□□□□□ -0.12
LCMT2O60294 TLE1P1-201ENST00000422965 589 ntBASIC14.31□□□□□ -0.12
LCMT2O60294 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LCMT2O60294 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.31□□□□□ -0.12
LCMT2O60294 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.31□□□□□ -0.12
LCMT2O60294 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.31□□□□□ -0.12
LCMT2O60294 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 INTS4P1-203ENST00000641008 3683 ntBASIC14.31□□□□□ -0.12
LCMT2O60294 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LCMT2O60294 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCMT2O60294 AL354989.2-201ENST00000435838 1540 ntBASIC14.31□□□□□ -0.12
LCMT2O60294 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCMT2O60294 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms