Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
TRIM38O00635 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRIM38O00635 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TRIM38O00635 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 AC006001.1-201ENST00000325130 474 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 MIR326-201ENST00000362220 95 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRIM38O00635 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM38O00635 FAM86HP-204ENST00000513466 959 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 AC078819.1-201ENST00000547454 765 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 AC012085.1-201ENST00000548270 765 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 C2orf69P2-201ENST00000562032 1123 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 AP005019.2-201ENST00000615104 511 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM38O00635 AC140479.7-201ENST00000636301 2332 ntBASIC15.13■□□□□ 0.01
TRIM38O00635 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM38O00635 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM38O00635 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM38O00635 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM38O00635 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM38O00635 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM38O00635 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM38O00635 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.12■□□□□ 0.01
TRIM38O00635 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 GOLGA2P4-201ENST00000441462 777 ntBASIC15.12■□□□□ 0.01
TRIM38O00635 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM38O00635 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM38O00635 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.12■□□□□ 0.01
TRIM38O00635 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 AL118558.3-201ENST00000607414 1079 ntBASIC15.12■□□□□ 0.01
TRIM38O00635 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.12■□□□□ 0.01
TRIM38O00635 AC145423.3-201ENST00000615987 467 ntBASIC15.12■□□□□ 0.01
TRIM38O00635 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.12■□□□□ 0.01
TRIM38O00635 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM38O00635 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
TRIM38O00635 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms