Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SOX1O00570 OR10N1P-201ENST00000392758 869 ntBASIC15.61■□□□□ 0.09
SOX1O00570 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.61■□□□□ 0.09
SOX1O00570 AC006328.1-201ENST00000437571 379 ntBASIC15.61■□□□□ 0.09
SOX1O00570 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 SLC25A15P1-201ENST00000456738 342 ntBASIC15.61■□□□□ 0.09
SOX1O00570 TPT1P6-201ENST00000458298 514 ntBASIC15.61■□□□□ 0.09
SOX1O00570 SLC25A15P3-201ENST00000505530 290 ntBASIC15.61■□□□□ 0.09
SOX1O00570 ALG3P1-201ENST00000508806 1114 ntBASIC15.61■□□□□ 0.09
SOX1O00570 MIR2278-201ENST00000516344 96 ntBASIC15.61■□□□□ 0.09
SOX1O00570 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.61■□□□□ 0.09
SOX1O00570 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.61■□□□□ 0.09
SOX1O00570 MIR4640-201ENST00000581824 90 ntBASIC15.61■□□□□ 0.09
SOX1O00570 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.61■□□□□ 0.09
SOX1O00570 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.61■□□□□ 0.09
SOX1O00570 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SOX1O00570 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SOX1O00570 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SOX1O00570 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.61■□□□□ 0.09
SOX1O00570 AC007292.2-201ENST00000593524 1812 ntBASIC15.61■□□□□ 0.09
SOX1O00570 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX1O00570 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 ME2P1-201ENST00000426028 1970 ntBASIC15.6■□□□□ 0.09
SOX1O00570 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SOX1O00570 REXO1L2P-201ENST00000425429 2069 ntBASIC15.6■□□□□ 0.09
SOX1O00570 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SOX1O00570 MIR648-201ENST00000385046 94 ntBASIC15.6■□□□□ 0.09
SOX1O00570 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SOX1O00570 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 AL080243.1-201ENST00000423293 1060 ntBASIC15.6■□□□□ 0.09
SOX1O00570 AC136604.1-202ENST00000425471 771 ntBASIC15.6■□□□□ 0.09
SOX1O00570 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.6■□□□□ 0.09
SOX1O00570 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.6■□□□□ 0.09
SOX1O00570 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC15.6■□□□□ 0.09
SOX1O00570 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.6■□□□□ 0.09
SOX1O00570 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 AC003686.1-201ENST00000550956 1034 ntBASIC15.6■□□□□ 0.09
SOX1O00570 KRT8P1-201ENST00000557533 1207 ntBASIC15.6■□□□□ 0.09
SOX1O00570 ANKRD26P1-203ENST00000569528 966 ntBASIC15.6■□□□□ 0.09
SOX1O00570 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 EEF1DP7-201ENST00000580496 513 ntBASIC15.6■□□□□ 0.09
SOX1O00570 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 CSTP2-201ENST00000610599 398 ntBASIC15.6■□□□□ 0.09
SOX1O00570 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.6■□□□□ 0.09
SOX1O00570 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.6■□□□□ 0.09
SOX1O00570 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.6■□□□□ 0.09
SOX1O00570 AC005865.2-202ENST00000635814 725 ntBASIC15.6■□□□□ 0.09
SOX1O00570 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SOX1O00570 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 TEKT4P2-202ENST00000559466 1312 ntBASIC15.6■□□□□ 0.09
SOX1O00570 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SOX1O00570 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
SOX1O00570 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX1O00570 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms