Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 ACE3P-201ENST00000423435 1973 ntBASIC17.26■□□□□ 0.35
USP17L11C9JVI0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP17L11C9JVI0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AGAP7P-201ENST00000582299 2062 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AC023157.3-201ENST00000619086 2088 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AGAP14-201ENST00000624701 2060 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AC003102.2-201ENST00000589195 1469 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 LINC00528-201ENST00000600723 2160 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AL353637.1-201ENST00000451571 732 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 RPS2P36-201ENST00000456516 831 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 RCC2P8-201ENST00000502779 1035 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AC020922.3-201ENST00000595064 547 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AC009884.2-201ENST00000603110 324 ntBASIC17.25■□□□□ 0.35
USP17L11C9JVI0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.25■□□□□ 0.35
USP17L11C9JVI0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 ZBED1P1-201ENST00000502364 1930 ntBASIC17.24■□□□□ 0.35
USP17L11C9JVI0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 ISCA2P1-201ENST00000425548 448 ntBASIC17.24■□□□□ 0.35
USP17L11C9JVI0 AC234782.1-201ENST00000451950 919 ntBASIC17.24■□□□□ 0.35
USP17L11C9JVI0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 ALG3P1-201ENST00000508806 1114 ntBASIC17.24■□□□□ 0.35
USP17L11C9JVI0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 AC090857.1-201ENST00000527400 390 ntBASIC17.24■□□□□ 0.35
USP17L11C9JVI0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 PRKXP1-201ENST00000561423 1122 ntBASIC17.24■□□□□ 0.35
USP17L11C9JVI0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.24■□□□□ 0.35
USP17L11C9JVI0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms