Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC236430.1-201ENST00000402231 743 ntBASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC002472.2-201ENST00000442739 958 ntBASIC12.08□□□□□ -0.48
SRRM4A7MD48 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 TPT1P11-201ENST00000458482 498 ntBASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ENPP7P5-201ENST00000541031 1031 ntBASIC12.08□□□□□ -0.48
SRRM4A7MD48 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 SPCS2P1-201ENST00000561636 679 ntBASIC12.08□□□□□ -0.48
SRRM4A7MD48 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC008494.3-201ENST00000606615 944 ntBASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 ACKR1-201ENST00000368121 1240 ntBASIC12.07□□□□□ -0.48
SRRM4A7MD48 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 AC004466.1-201ENST00000599515 1080 ntBASIC12.07□□□□□ -0.48
SRRM4A7MD48 WFDC1-204ENST00000613603 549 ntBASIC12.07□□□□□ -0.48
SRRM4A7MD48 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 AGGF1P1-201ENST00000509500 2073 ntBASIC12.07□□□□□ -0.48
SRRM4A7MD48 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SRRM4A7MD48 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms