Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 MYO15B-237ENST00000642007 4893 ntBASIC17.08■□□□□ 0.32
CLIC4Q9Y696 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 FLJ16779-201ENST00000612722 7638 ntBASIC17.08■□□□□ 0.32
CLIC4Q9Y696 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.08■□□□□ 0.32
CLIC4Q9Y696 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 RPSAP52-203ENST00000622976 1023 ntBASIC17.08■□□□□ 0.32
CLIC4Q9Y696 AL603764.1-201ENST00000636452 321 ntBASIC17.08■□□□□ 0.32
CLIC4Q9Y696 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC4Q9Y696 CICP4-201ENST00000447359 2812 ntBASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 RN7SKP230-201ENST00000365642 335 ntBASIC17.07■□□□□ 0.32
CLIC4Q9Y696 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 DGCR5-201ENST00000399539 862 ntBASIC17.07■□□□□ 0.32
CLIC4Q9Y696 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 AC022137.2-201ENST00000503482 481 ntBASIC17.07■□□□□ 0.32
CLIC4Q9Y696 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC4Q9Y696 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 INE2-201ENST00000630399 1874 ntBASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AL138725.1-201ENST00000407347 1314 ntBASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AC092135.3-201ENST00000624151 1846 ntBASIC17.06■□□□□ 0.32
CLIC4Q9Y696 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AL162726.2-201ENST00000438986 1017 ntBASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AC140912.1-201ENST00000577171 1054 ntBASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms