Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 AL662890.1-201ENST00000396818 632 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 RN7SL163P-201ENST00000583100 276 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 AC138696.2-201ENST00000607376 223 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 AL021578.1-201ENST00000613646 709 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 AC020910.5-201ENST00000623668 1865 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 PAUPAR-201ENST00000630360 2965 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 WASH3P-207ENST00000560956 1394 ntBASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 TSPY26P-202ENST00000565928 3884 ntBASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 INE2-201ENST00000630399 1874 ntBASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AL008707.1-201ENST00000422498 534 ntBASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AC011742.3-201ENST00000439053 820 ntBASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 Z97180.1-201ENST00000445173 988 ntBASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AL136295.7-201ENST00000619226 1200 ntBASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CTDP1Q9Y5B0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 SHC1P1-201ENST00000425230 1745 ntBASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CTDP1Q9Y5B0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 AC136621.1-201ENST00000624017 2304 ntBASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms