Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
IFT52Q9Y366 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT52Q9Y366 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 RPL13AP25-201ENST00000484130 612 ntBASIC14.12□□□□□ -0.15
IFT52Q9Y366 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 AC139530.3-201ENST00000620344 690 ntBASIC14.12□□□□□ -0.15
IFT52Q9Y366 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 CLK3P2-201ENST00000427566 1453 ntBASIC14.12□□□□□ -0.15
IFT52Q9Y366 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
IFT52Q9Y366 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFT52Q9Y366 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 AC018442.1-201ENST00000421439 2061 ntBASIC14.11□□□□□ -0.15
IFT52Q9Y366 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 MEP1AP4-201ENST00000423244 1087 ntBASIC14.11□□□□□ -0.15
IFT52Q9Y366 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 AC004890.2-204ENST00000481968 304 ntBASIC14.11□□□□□ -0.15
IFT52Q9Y366 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFT52Q9Y366 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.11□□□□□ -0.15
IFT52Q9Y366 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.11□□□□□ -0.15
IFT52Q9Y366 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms