Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 AC025181.2-201ENST00000606994 802 ntBASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AC004870.1-201ENST00000315132 882 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 KRT18P2-201ENST00000447938 1258 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 SLED1-202ENST00000512051 380 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AC022447.6-201ENST00000515522 438 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AC243562.1-201ENST00000560672 389 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AC026120.1-201ENST00000611536 926 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 UXT-AS1-201ENST00000590504 1525 ntBASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms