Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC063950.1-202ENST00000600133 568 ntBASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 ACTBP8-201ENST00000403258 1108 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AC098850.1-201ENST00000419919 790 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 MTND2P3-201ENST00000452458 470 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 ELK1P1-201ENST00000485699 580 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AC025423.2-201ENST00000537570 439 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 CHCHD2P3-201ENST00000603038 451 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AC024933.1-201ENST00000608472 348 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 AP000720.1-201ENST00000625091 483 ntBASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC15.02■□□□□ -0
VPS9D1Q9Y2B5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS9D1Q9Y2B5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AC018529.2-202ENST00000611482 3087 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AC023090.2-201ENST00000625182 2110 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms