Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 BOLA2P3-201ENST00000404566 256 ntBASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 RPL7P3-201ENST00000441388 714 ntBASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 CROCCP4-201ENST00000457096 498 ntBASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 RHOXF1P1-202ENST00000635473 501 ntBASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGC3Q9UN70 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 AC005089.1-201ENST00000619486 2241 ntBASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 AC103988.2-201ENST00000561804 725 ntBASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 RN7SL713P-201ENST00000582127 302 ntBASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 INTS4P1-203ENST00000641008 3683 ntBASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGC3Q9UN70 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms