Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 HOMER2P2-201ENST00000451621 847 ntBASIC14.3□□□□□ -0.12
CCDC88CQ9P219 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 AC100850.1-201ENST00000506768 649 ntBASIC14.3□□□□□ -0.12
CCDC88CQ9P219 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 ACE3P-201ENST00000423435 1973 ntBASIC14.3□□□□□ -0.12
CCDC88CQ9P219 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC88CQ9P219 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 AC006001.1-201ENST00000325130 474 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 ACTBP11-201ENST00000436287 1126 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 AC007292.2-201ENST00000593524 1812 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 YBX1P6-201ENST00000442962 1002 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 HSPB1P2-201ENST00000448722 546 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 PFN1P12-201ENST00000455938 534 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 AP005019.2-201ENST00000615104 511 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 AC132938.4-201ENST00000623835 848 ntBASIC14.29□□□□□ -0.12
CCDC88CQ9P219 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms