Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SP110Q9HB58 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SP110Q9HB58 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 AC023824.1-201ENST00000562945 2975 ntBASIC15.38■□□□□ 0.05
SP110Q9HB58 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SP110Q9HB58 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.38■□□□□ 0.05
SP110Q9HB58 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.38■□□□□ 0.05
SP110Q9HB58 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SP110Q9HB58 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
SP110Q9HB58 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.37■□□□□ 0.05
SP110Q9HB58 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.37■□□□□ 0.05
SP110Q9HB58 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 BOLA2P3-201ENST00000404566 256 ntBASIC15.37■□□□□ 0.05
SP110Q9HB58 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.37■□□□□ 0.05
SP110Q9HB58 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.37■□□□□ 0.05
SP110Q9HB58 FAM197Y7-201ENST00000432892 766 ntBASIC15.37■□□□□ 0.05
SP110Q9HB58 U91328.1-201ENST00000437528 223 ntBASIC15.37■□□□□ 0.05
SP110Q9HB58 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SP110Q9HB58 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.37■□□□□ 0.05
SP110Q9HB58 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.37■□□□□ 0.05
SP110Q9HB58 AC138951.2-201ENST00000623455 1161 ntBASIC15.37■□□□□ 0.05
SP110Q9HB58 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SP110Q9HB58 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.37■□□□□ 0.05
SP110Q9HB58 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.37■□□□□ 0.05
SP110Q9HB58 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SP110Q9HB58 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.37■□□□□ 0.05
SP110Q9HB58 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
SP110Q9HB58 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SP110Q9HB58 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP110Q9HB58 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 CICP23-201ENST00000605013 2741 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 CICP24-201ENST00000605464 2705 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 POM121L8P-201ENST00000417732 1281 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 AC112492.5-201ENST00000421897 457 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 AC007969.1-201ENST00000433675 447 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 POM121L9P-203ENST00000441984 1285 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 GPR53P-205ENST00000457298 1084 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 RNA5SP486-201ENST00000515961 83 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.36■□□□□ 0.05
SP110Q9HB58 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.36■□□□□ 0.05
SP110Q9HB58 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 PDIA3P1-201ENST00000471856 1510 ntBASIC15.36■□□□□ 0.05
SP110Q9HB58 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP110Q9HB58 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SP110Q9HB58 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SP110Q9HB58 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms