Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 TLE1P1-201ENST00000422965 589 ntBASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 AL033527.5-201ENST00000641382 801 ntBASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 AC015802.1-201ENST00000588104 1449 ntBASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC40Q9H9A6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 AC093433.1-201ENST00000458048 571 ntBASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 AL354702.1-201ENST00000442006 1960 ntBASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC40Q9H9A6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms