Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SLIRPQ9GZT3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.17□□□□□ -0.3
SLIRPQ9GZT3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 DMBT1P1-203ENST00000636837 4628 ntBASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AC107375.1-201ENST00000564464 2231 ntBASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 ATP5G2P1-201ENST00000433580 426 ntBASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 VN2R19P-201ENST00000442399 1052 ntBASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AC012640.2-201ENST00000561606 901 ntBASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 Z98257.2-202ENST00000641138 1548 ntBASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 IER3-202ENST00000376377 1350 ntBASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.16□□□□□ -0.3
SLIRPQ9GZT3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLIRPQ9GZT3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms