Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 C1QBPP1-201ENST00000400117 770 ntBASIC13.85□□□□□ -0.19
TRIM2Q9C040 AC087499.6-201ENST00000411576 835 ntBASIC13.85□□□□□ -0.19
TRIM2Q9C040 COX5BP8-201ENST00000416911 349 ntBASIC13.85□□□□□ -0.19
TRIM2Q9C040 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 AC244107.1-201ENST00000442033 332 ntBASIC13.84□□□□□ -0.19
TRIM2Q9C040 AC114812.1-204ENST00000449669 728 ntBASIC13.84□□□□□ -0.19
TRIM2Q9C040 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 AL603764.1-201ENST00000636452 321 ntBASIC13.84□□□□□ -0.19
TRIM2Q9C040 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.84□□□□□ -0.19
TRIM2Q9C040 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM2Q9C040 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM2Q9C040 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM2Q9C040 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.83□□□□□ -0.19
TRIM2Q9C040 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM2Q9C040 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM2Q9C040 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM2Q9C040 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM2Q9C040 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TRIM2Q9C040 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms