Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 RCC2P8-201ENST00000502779 1035 ntBASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 AL136295.7-201ENST00000619226 1200 ntBASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 AC144831.1-201ENST00000573312 2656 ntBASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 KRT8P19-201ENST00000551916 1455 ntBASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PAAF1Q9BRP4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PAAF1Q9BRP4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 TCAF2P1-201ENST00000291129 2421 ntBASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 RN7SKP214-201ENST00000364208 315 ntBASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 RN7SL720P-201ENST00000488178 304 ntBASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AL133499.1-201ENST00000596207 608 ntBASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AP000346.4-201ENST00000614827 381 ntBASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AJ011931.1-201ENST00000618749 2492 ntBASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 AC144522.1-201ENST00000625111 1658 ntBASIC15.83■□□□□ 0.12
PAAF1Q9BRP4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 AC134698.3-201ENST00000523880 214 ntBASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 AC009884.2-201ENST00000603110 324 ntBASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 TMBIM7P-202ENST00000641474 1516 ntBASIC15.82■□□□□ 0.12
PAAF1Q9BRP4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms