Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC22CQ9BRL7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 AC104457.1-201ENST00000401024 814 ntBASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SEC22CQ9BRL7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 AL445209.1-201ENST00000607269 3491 ntBASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC22CQ9BRL7 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 AC105233.2-201ENST00000523697 349 ntBASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 AF228730.5-201ENST00000530288 346 ntBASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 REXO1L6P-202ENST00000619970 1078 ntBASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms