Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 AC112492.5-201ENST00000421897 457 ntBASIC13.35□□□□□ -0.27
VRK1Q99986 TMEM14DP-201ENST00000422205 345 ntBASIC13.35□□□□□ -0.27
VRK1Q99986 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.35□□□□□ -0.27
VRK1Q99986 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.35□□□□□ -0.27
VRK1Q99986 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.35□□□□□ -0.27
VRK1Q99986 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 AJ011931.1-201ENST00000618749 2492 ntBASIC13.35□□□□□ -0.27
VRK1Q99986 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.35□□□□□ -0.27
VRK1Q99986 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VRK1Q99986 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VRK1Q99986 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.34□□□□□ -0.27
VRK1Q99986 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.34□□□□□ -0.27
VRK1Q99986 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
VRK1Q99986 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 SOCS2P1-201ENST00000417727 557 ntBASIC13.34□□□□□ -0.27
VRK1Q99986 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.34□□□□□ -0.27
VRK1Q99986 ACA64.2-201ENST00000459014 129 ntBASIC13.34□□□□□ -0.27
VRK1Q99986 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.34□□□□□ -0.27
VRK1Q99986 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.34□□□□□ -0.27
VRK1Q99986 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.34□□□□□ -0.27
VRK1Q99986 AL359711.2-201ENST00000563105 872 ntBASIC13.34□□□□□ -0.27
VRK1Q99986 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms