Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 AL031719.1-201ENST00000623365 2587 ntBASIC9.97□□□□□ -0.81
LITAFQ99732 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC9.96□□□□□ -0.81
LITAFQ99732 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
LITAFQ99732 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
LITAFQ99732 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
LITAFQ99732 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
LITAFQ99732 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.96□□□□□ -0.81
LITAFQ99732 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
LITAFQ99732 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
LITAFQ99732 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 AL137783.1-201ENST00000623494 1896 ntBASIC9.96□□□□□ -0.81
LITAFQ99732 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
LITAFQ99732 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
LITAFQ99732 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC9.96□□□□□ -0.81
LITAFQ99732 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 AL022323.5-201ENST00000624101 2059 ntBASIC9.96□□□□□ -0.81
LITAFQ99732 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LITAFQ99732 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
LITAFQ99732 AC002056.1-201ENST00000395613 760 ntBASIC9.96□□□□□ -0.82
LITAFQ99732 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC9.96□□□□□ -0.82
LITAFQ99732 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC9.96□□□□□ -0.82
LITAFQ99732 KRT18P64-201ENST00000434946 1219 ntBASIC9.96□□□□□ -0.82
LITAFQ99732 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC9.96□□□□□ -0.82
LITAFQ99732 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC9.96□□□□□ -0.82
LITAFQ99732 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC9.96□□□□□ -0.82
LITAFQ99732 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC9.96□□□□□ -0.82
LITAFQ99732 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC9.96□□□□□ -0.82
LITAFQ99732 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC9.96□□□□□ -0.82
LITAFQ99732 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC9.96□□□□□ -0.82
LITAFQ99732 GPR39-203ENST00000622084 900 ntTSL 5 BASIC9.96□□□□□ -0.82
LITAFQ99732 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
LITAFQ99732 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 AKAP8P1-201ENST00000434743 1349 ntBASIC9.96□□□□□ -0.82
LITAFQ99732 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
LITAFQ99732 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC9.96□□□□□ -0.82
LITAFQ99732 KRT8P14-201ENST00000414254 1442 ntBASIC9.96□□□□□ -0.82
LITAFQ99732 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 AC024075.2-201ENST00000598112 1473 ntBASIC9.96□□□□□ -0.82
LITAFQ99732 AC125807.2-201ENST00000513358 3514 ntBASIC9.96□□□□□ -0.82
LITAFQ99732 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC9.96□□□□□ -0.82
LITAFQ99732 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC9.96□□□□□ -0.82
LITAFQ99732 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC9.96□□□□□ -0.82
LITAFQ99732 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.82
LITAFQ99732 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LITAFQ99732 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms