Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 MEX3B-202ENST00000558133 4333 ntBASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 AC073621.1-201ENST00000392730 636 ntBASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 SCARNA2-201ENST00000458748 420 ntBASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 AC091304.2-201ENST00000564639 760 ntBASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 AC107918.4-202ENST00000641623 219 ntBASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IPQ96QF0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 AC104457.1-201ENST00000401024 814 ntBASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 AL139010.1-201ENST00000454878 894 ntBASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 AC025062.2-201ENST00000605477 670 ntBASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IPQ96QF0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms