Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 RNA5SP359-201ENST00000364838 113 ntBASIC19.44■□□□□ 0.7
NBPF4Q96M43 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 RPS9P1-201ENST00000419943 583 ntBASIC19.44■□□□□ 0.7
NBPF4Q96M43 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 RPL17P45-201ENST00000586289 509 ntBASIC19.44■□□□□ 0.7
NBPF4Q96M43 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 AC138035.3-201ENST00000622706 2791 ntBASIC19.44■□□□□ 0.7
NBPF4Q96M43 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 PPT1-215ENST00000641471 2368 ntBASIC19.44■□□□□ 0.7
NBPF4Q96M43 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 AC091951.1-201ENST00000512854 2465 ntBASIC19.44■□□□□ 0.7
NBPF4Q96M43 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NBPF4Q96M43 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 AL136172.1-201ENST00000598590 1394 ntBASIC19.44■□□□□ 0.7
NBPF4Q96M43 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NBPF4Q96M43 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 AC006504.5-208ENST00000588784 2401 ntBASIC19.43■□□□□ 0.7
NBPF4Q96M43 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 AL583805.1-201ENST00000391389 531 ntBASIC19.43■□□□□ 0.7
NBPF4Q96M43 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 PFN2-202ENST00000423691 911 ntTSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 RPSAP15-201ENST00000448168 861 ntBASIC19.43■□□□□ 0.7
NBPF4Q96M43 AP000358.1-201ENST00000456260 156 ntBASIC19.43■□□□□ 0.7
NBPF4Q96M43 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 MIR4522-201ENST00000584932 87 ntBASIC19.43■□□□□ 0.7
NBPF4Q96M43 AC005632.3-201ENST00000605544 308 ntBASIC19.43■□□□□ 0.7
NBPF4Q96M43 AC007881.3-201ENST00000608897 607 ntBASIC19.43■□□□□ 0.7
NBPF4Q96M43 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.43■□□□□ 0.7
NBPF4Q96M43 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NBPF4Q96M43 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 AC008741.2-201ENST00000612792 3115 ntBASIC19.42■□□□□ 0.7
NBPF4Q96M43 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms