Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 AL513523.2-202ENST00000427283 2040 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.79□□□□□ -0.36
USP9XQ93008 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
USP9XQ93008 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.78□□□□□ -0.36
USP9XQ93008 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 HNRNPABP1-201ENST00000406003 734 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.78□□□□□ -0.36
USP9XQ93008 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.78□□□□□ -0.36
USP9XQ93008 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.78□□□□□ -0.36
USP9XQ93008 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 BCRP4-201ENST00000506079 804 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 AC090136.2-201ENST00000517809 420 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 OR3A1-202ENST00000615105 966 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.78□□□□□ -0.36
USP9XQ93008 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 AP002353.1-201ENST00000528257 1599 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.78□□□□□ -0.36
USP9XQ93008 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
USP9XQ93008 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.78□□□□□ -0.36
USP9XQ93008 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.78□□□□□ -0.36
USP9XQ93008 NAT9-219ENST00000582524 573 ntTSL 4 BASIC12.78□□□□□ -0.36
USP9XQ93008 AC087072.1-201ENST00000603727 421 ntBASIC12.78□□□□□ -0.36
USP9XQ93008 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.78□□□□□ -0.36
USP9XQ93008 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.78□□□□□ -0.36
USP9XQ93008 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.78□□□□□ -0.36
USP9XQ93008 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USP9XQ93008 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 GEMIN8P4-201ENST00000380526 729 ntBASIC12.77□□□□□ -0.36
USP9XQ93008 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.77□□□□□ -0.36
USP9XQ93008 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 GUSBP10-201ENST00000417412 665 ntBASIC12.77□□□□□ -0.36
USP9XQ93008 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.77□□□□□ -0.36
USP9XQ93008 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.77□□□□□ -0.36
USP9XQ93008 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.77□□□□□ -0.36
USP9XQ93008 EEF1DP7-201ENST00000580496 513 ntBASIC12.77□□□□□ -0.36
USP9XQ93008 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.77□□□□□ -0.36
USP9XQ93008 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
USP9XQ93008 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
USP9XQ93008 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.77□□□□□ -0.36
USP9XQ93008 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
USP9XQ93008 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms