Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 LINC00552-201ENST00000625151 2579 ntBASIC15.31■□□□□ 0.04
PTCD2Q8WV60 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 KRT17P8-201ENST00000540749 863 ntBASIC15.31■□□□□ 0.04
PTCD2Q8WV60 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 SNX29P1-201ENST00000548357 1007 ntBASIC15.31■□□□□ 0.04
PTCD2Q8WV60 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTCD2Q8WV60 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 ATG10-IT1-201ENST00000396880 487 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 SOCS2P1-201ENST00000417727 557 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AC083899.2-201ENST00000423285 1376 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AL162726.2-201ENST00000438986 1017 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 ACA64.2-201ENST00000459014 129 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 TDH-203ENST00000531764 1110 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AL162274.1-201ENST00000617191 1098 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 BX539320.1-201ENST00000623759 877 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AL157414.3-201ENST00000624276 1954 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 AL603764.1-201ENST00000636452 321 ntBASIC15.3■□□□□ 0.04
PTCD2Q8WV60 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTCD2Q8WV60 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms