Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 UPF3AP3-201ENST00000420996 769 ntBASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 AC005237.2-201ENST00000434368 219 ntBASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD2Q8NHY2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 RPSAP43-201ENST00000402237 625 ntBASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD2Q8NHY2 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD2Q8NHY2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms