Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SIX5Q8N196 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 CTBP2P4-201ENST00000513884 920 ntBASIC15.38■□□□□ 0.05
SIX5Q8N196 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.38■□□□□ 0.05
SIX5Q8N196 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 AC009779.1-201ENST00000551138 283 ntBASIC15.38■□□□□ 0.05
SIX5Q8N196 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.38■□□□□ 0.05
SIX5Q8N196 AC008805.1-201ENST00000590892 364 ntBASIC15.38■□□□□ 0.05
SIX5Q8N196 AC007718.1-201ENST00000621078 280 ntBASIC15.38■□□□□ 0.05
SIX5Q8N196 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 AC002472.3-201ENST00000640124 621 ntBASIC15.38■□□□□ 0.05
SIX5Q8N196 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 AGGF1P2-201ENST00000426656 2106 ntBASIC15.38■□□□□ 0.05
SIX5Q8N196 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.38■□□□□ 0.05
SIX5Q8N196 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SIX5Q8N196 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SIX5Q8N196 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.37■□□□□ 0.05
SIX5Q8N196 SHC1P1-201ENST00000425230 1745 ntBASIC15.37■□□□□ 0.05
SIX5Q8N196 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.37■□□□□ 0.05
SIX5Q8N196 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SIX5Q8N196 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.37■□□□□ 0.05
SIX5Q8N196 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.37■□□□□ 0.05
SIX5Q8N196 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
SIX5Q8N196 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.37■□□□□ 0.05
SIX5Q8N196 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.37■□□□□ 0.05
SIX5Q8N196 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.37■□□□□ 0.05
SIX5Q8N196 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 DUX4L46-201ENST00000566845 751 ntBASIC15.37■□□□□ 0.05
SIX5Q8N196 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.37■□□□□ 0.05
SIX5Q8N196 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.37■□□□□ 0.05
SIX5Q8N196 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SIX5Q8N196 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.37■□□□□ 0.05
SIX5Q8N196 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.37■□□□□ 0.05
SIX5Q8N196 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIX5Q8N196 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 AC084364.1-201ENST00000551967 1556 ntBASIC15.36■□□□□ 0.05
SIX5Q8N196 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 AP000356.3-201ENST00000382243 753 ntBASIC15.36■□□□□ 0.05
SIX5Q8N196 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms