Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AL592309.1-201ENST00000443127 649 ntBASIC15.06■□□□□ 0
TRIM42Q8IWZ5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 AC022145.2-201ENST00000598203 171 ntBASIC15.06■□□□□ 0
TRIM42Q8IWZ5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 AC074044.1-201ENST00000609673 707 ntBASIC15.06■□□□□ 0
TRIM42Q8IWZ5 AC018529.1-201ENST00000613063 361 ntBASIC15.06■□□□□ 0
TRIM42Q8IWZ5 MIR6069-201ENST00000620069 79 ntBASIC15.06■□□□□ 0
TRIM42Q8IWZ5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 Z97205.2-201ENST00000564697 1639 ntBASIC15.06■□□□□ 0
TRIM42Q8IWZ5 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM42Q8IWZ5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM42Q8IWZ5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AC069335.1-201ENST00000489972 472 ntBASIC15.05■□□□□ -0
TRIM42Q8IWZ5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AC004835.2-201ENST00000603762 682 ntBASIC15.05■□□□□ -0
TRIM42Q8IWZ5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM42Q8IWZ5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms