Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 AL033527.4-201ENST00000641026 673 ntBASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AC006058.4-201ENST00000624016 1670 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AL360270.3-201ENST00000609118 1348 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AC006001.1-201ENST00000325130 474 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 RN7SL219P-201ENST00000582872 296 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AC006453.4-201ENST00000636949 1252 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AC008687.7-202ENST00000637404 953 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AC023024.2-201ENST00000623561 1993 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 AL157414.3-201ENST00000624276 1954 ntBASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM48Q8IWZ4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM48Q8IWZ4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 HLA-K-203ENST00000430151 1046 ntBASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM48Q8IWZ4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms