Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC6Q8IVU3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.16■□□□□ 0.18
HERC6Q8IVU3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HERC6Q8IVU3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 FAM90A2P-201ENST00000511144 1395 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 FAM90A25P-201ENST00000528404 1395 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 AC011840.2-201ENST00000563063 1520 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 AL157414.3-201ENST00000624276 1954 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 CTBP2P4-201ENST00000513884 920 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 DNM1P30-201ENST00000563586 452 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 AC026803.1-201ENST00000569130 274 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 AC020910.5-201ENST00000623668 1865 ntBASIC16.15■□□□□ 0.18
HERC6Q8IVU3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC6Q8IVU3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HERC6Q8IVU3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HERC6Q8IVU3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HERC6Q8IVU3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HERC6Q8IVU3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AP000356.3-201ENST00000382243 753 ntBASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AC078875.1-201ENST00000431907 724 ntBASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AC079112.1-201ENST00000454972 939 ntBASIC16.14■□□□□ 0.17
HERC6Q8IVU3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AC138894.2-201ENST00000602838 371 ntBASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AC008825.2-201ENST00000603374 718 ntBASIC16.14■□□□□ 0.17
HERC6Q8IVU3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 KRT8P21-201ENST00000430398 1491 ntBASIC16.14■□□□□ 0.17
HERC6Q8IVU3 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.14■□□□□ 0.17
HERC6Q8IVU3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HERC6Q8IVU3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 CAP2P1-201ENST00000557743 1390 ntBASIC16.13■□□□□ 0.17
HERC6Q8IVU3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.13■□□□□ 0.17
HERC6Q8IVU3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms