Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RNU1-114P-201ENST00000365297 166 ntBASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 MIR770-201ENST00000390219 98 ntBASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC027796.2-201ENST00000575326 344 ntBASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AL132655.2-201ENST00000596276 594 ntBASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC004233.3-201ENST00000607794 1269 ntBASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC093726.1-201ENST00000608064 963 ntBASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 AC008761.3-201ENST00000624803 892 ntBASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 KRT8P22-201ENST00000562317 1415 ntBASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 AC007541.1-201ENST00000570282 1469 ntBASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 AL139094.1-201ENST00000405549 1188 ntBASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 TSPY16P-201ENST00000449843 468 ntBASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 AC124283.3-201ENST00000570869 594 ntBASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 AC099568.2-201ENST00000609194 695 ntBASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00346Q8IVM7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms