Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AP000356.3-201ENST00000382243 753 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 KRT18P36-201ENST00000411618 1276 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 RPS9P1-201ENST00000419943 583 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 PGAM1P5-201ENST00000548011 764 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AC138894.2-201ENST00000602838 371 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AC242376.2-201ENST00000619355 883 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 YRDCP1-201ENST00000621419 643 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AHCYP4-201ENST00000419201 1315 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 TMBIM7P-202ENST00000641474 1516 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 AC015909.3-201ENST00000572855 1794 ntBASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 AC013726.1-201ENST00000563747 2285 ntBASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 AP000358.1-201ENST00000456260 156 ntBASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 AP002803.1-201ENST00000528836 498 ntBASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 AC135983.4-201ENST00000564116 1262 ntBASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 SSR4P1-203ENST00000599569 2260 ntBASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
NPAS4Q8IUM7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AL583805.1-201ENST00000391389 531 ntBASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 RPL7P35-201ENST00000446943 740 ntBASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AC130709.1-201ENST00000484779 1212 ntBASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AC093752.3-201ENST00000567343 901 ntBASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
NPAS4Q8IUM7 AC005632.3-201ENST00000605544 308 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms