Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF135Q8IUD6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 KRT18P66-201ENST00000452970 1269 ntBASIC15.92■□□□□ 0.14
RNF135Q8IUD6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 NPM1P43-201ENST00000558669 786 ntBASIC15.92■□□□□ 0.14
RNF135Q8IUD6 AC135983.4-201ENST00000564116 1262 ntBASIC15.92■□□□□ 0.14
RNF135Q8IUD6 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 SSR4P1-203ENST00000599569 2260 ntBASIC15.92■□□□□ 0.14
RNF135Q8IUD6 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF135Q8IUD6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 DPM3-202ENST00000368399 517 ntBASIC15.91■□□□□ 0.14
RNF135Q8IUD6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 FGFR3P1-201ENST00000449999 601 ntBASIC15.91■□□□□ 0.14
RNF135Q8IUD6 NOC2LP1-201ENST00000450578 752 ntBASIC15.91■□□□□ 0.14
RNF135Q8IUD6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 AC021723.1-201ENST00000486306 515 ntBASIC15.91■□□□□ 0.14
RNF135Q8IUD6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 ENPP7P14-201ENST00000621765 1040 ntBASIC15.91■□□□□ 0.14
RNF135Q8IUD6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms