Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 MIR645-201ENST00000385283 94 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 ACTG1P19-201ENST00000418987 1116 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 RPL35P9-201ENST00000446059 350 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PPIA-208ENST00000489459 907 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PPIA-210ENST00000620047 827 ntTSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 MIR6746-201ENST00000620971 63 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AL137077.2-201ENST00000635124 1608 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 RBM4-207ENST00000506523 654 ntTSL 3 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AC113347.2-201ENST00000512350 279 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 MIR6125-201ENST00000618986 96 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC091951.1-201ENST00000512854 2465 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 RNVU1-8-201ENST00000364272 125 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AL929302.1-201ENST00000426556 871 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 RPL18AP8-201ENST00000486071 528 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC083801.1-201ENST00000491689 358 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 RPS23-204ENST00000507980 836 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 BCL2L12P1-201ENST00000508390 733 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 F11R-204ENST00000537746 1245 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AP005212.2-201ENST00000584979 510 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC136621.1-201ENST00000624017 2304 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 NME4-203ENST00000397722 1232 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC092580.1-201ENST00000433998 658 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 DPY19L2P5-201ENST00000456300 331 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 PMEL-214ENST00000550447 901 ntTSL 3 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 HERC2P11-201ENST00000562845 725 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms