Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 AC015688.4-201ENST00000580780 1647 ntBASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 LINC00528-201ENST00000600723 2160 ntBASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 Z69890.1-201ENST00000382990 339 ntBASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 RPL18AP8-201ENST00000486071 528 ntBASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 API5-208ENST00000531273 1868 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC141Q6ZP82 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 AC092638.2-201ENST00000441105 947 ntBASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 AC004837.1-201ENST00000446267 564 ntBASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 AC138466.5-201ENST00000624002 808 ntBASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 PARN-202ENST00000420015 2360 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC141Q6ZP82 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 LAP3P2-201ENST00000454686 1454 ntBASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 DPY19L2P5-201ENST00000456300 331 ntBASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 RNA5SP417-201ENST00000516459 108 ntBASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC141Q6ZP82 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 LINC00634-202ENST00000505157 222 ntBASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC141Q6ZP82 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 PYY2-201ENST00000315776 282 ntBASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC141Q6ZP82 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms