Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 MIR1227-201ENST00000408484 88 ntBASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 AP000911.2-201ENST00000534330 502 ntBASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 KRT17P5-201ENST00000332088 839 ntBASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 ALG1L6P-201ENST00000515248 758 ntBASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AC141586.1-203ENST00000567242 366 ntBASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 AL136172.1-201ENST00000598590 1394 ntBASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNKSR3Q6P9H4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 BAK1P1-201ENST00000317045 636 ntBASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AC004837.1-201ENST00000446267 564 ntBASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AC138701.2-201ENST00000553634 226 ntBASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms