Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 MIR3180-1-201ENST00000580374 94 ntBASIC11.38□□□□□ -0.59
MRPL54Q6P161 MIR3180-3-201ENST00000584616 94 ntBASIC11.38□□□□□ -0.59
MRPL54Q6P161 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CYP4F24P-201ENST00000586049 1580 ntBASIC11.37□□□□□ -0.59
MRPL54Q6P161 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 AC004945.1-201ENST00000416738 983 ntBASIC11.37□□□□□ -0.59
MRPL54Q6P161 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 AC090505.1-201ENST00000430515 1834 ntBASIC11.37□□□□□ -0.59
MRPL54Q6P161 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL54Q6P161 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL54Q6P161 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL54Q6P161 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL54Q6P161 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL54Q6P161 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL54Q6P161 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL54Q6P161 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL54Q6P161 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms