Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FOXD4Q12950 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXD4Q12950 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXD4Q12950 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 AL596325.1-201ENST00000563991 1082 ntBASIC14.42□□□□□ -0.1
FOXD4Q12950 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 AC097359.3-201ENST00000603982 1210 ntBASIC14.42□□□□□ -0.1
FOXD4Q12950 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 AC073957.3-201ENST00000609998 6758 ntBASIC14.42□□□□□ -0.1
FOXD4Q12950 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXD4Q12950 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXD4Q12950 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXD4Q12950 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
FOXD4Q12950 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXD4Q12950 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD4Q12950 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 LINC00538-201ENST00000626109 1906 ntBASIC14.41□□□□□ -0.1
FOXD4Q12950 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
FOXD4Q12950 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXD4Q12950 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXD4Q12950 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 RBPMS2P1-201ENST00000437762 623 ntBASIC14.41□□□□□ -0.1
FOXD4Q12950 AC245100.3-201ENST00000441281 285 ntBASIC14.41□□□□□ -0.1
FOXD4Q12950 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXD4Q12950 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXD4Q12950 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 RN7SL692P-201ENST00000464677 288 ntBASIC14.41□□□□□ -0.1
FOXD4Q12950 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXD4Q12950 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.41□□□□□ -0.1
FOXD4Q12950 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.41□□□□□ -0.1
FOXD4Q12950 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 LINC01101-201ENST00000622953 1884 ntBASIC14.41□□□□□ -0.1
FOXD4Q12950 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD4Q12950 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD4Q12950 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
FOXD4Q12950 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms