Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.83■□□□□ 0.28
SREBF2Q12772 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SREBF2Q12772 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SREBF2Q12772 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.82■□□□□ 0.28
SREBF2Q12772 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.82■□□□□ 0.28
SREBF2Q12772 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.82■□□□□ 0.28
SREBF2Q12772 AC025183.3-201ENST00000623526 1482 ntBASIC16.82■□□□□ 0.28
SREBF2Q12772 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SREBF2Q12772 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SREBF2Q12772 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.82■□□□□ 0.28
SREBF2Q12772 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.82■□□□□ 0.28
SREBF2Q12772 MIR566-201ENST00000385187 94 ntBASIC16.82■□□□□ 0.28
SREBF2Q12772 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.82■□□□□ 0.28
SREBF2Q12772 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.82■□□□□ 0.28
SREBF2Q12772 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.82■□□□□ 0.28
SREBF2Q12772 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.82■□□□□ 0.28
SREBF2Q12772 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 ABHD17AP9-201ENST00000561925 548 ntBASIC16.82■□□□□ 0.28
SREBF2Q12772 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SREBF2Q12772 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SREBF2Q12772 LINC00244-201ENST00000625073 613 ntBASIC16.82■□□□□ 0.28
SREBF2Q12772 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.82■□□□□ 0.28
SREBF2Q12772 AC013726.1-201ENST00000563747 2285 ntBASIC16.82■□□□□ 0.28
SREBF2Q12772 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SREBF2Q12772 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.82■□□□□ 0.28
SREBF2Q12772 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.82■□□□□ 0.28
SREBF2Q12772 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SREBF2Q12772 AC079328.2-201ENST00000561241 3354 ntBASIC16.81■□□□□ 0.28
SREBF2Q12772 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.81■□□□□ 0.28
SREBF2Q12772 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.81■□□□□ 0.28
SREBF2Q12772 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
SREBF2Q12772 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SREBF2Q12772 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.81■□□□□ 0.28
SREBF2Q12772 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SREBF2Q12772 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 AL603832.2-201ENST00000566195 2125 ntBASIC16.81■□□□□ 0.28
SREBF2Q12772 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.81■□□□□ 0.28
SREBF2Q12772 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.81■□□□□ 0.28
SREBF2Q12772 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.81■□□□□ 0.28
SREBF2Q12772 RN7SL582P-201ENST00000491078 279 ntBASIC16.81■□□□□ 0.28
SREBF2Q12772 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.81■□□□□ 0.28
SREBF2Q12772 AC021016.3-201ENST00000608367 477 ntBASIC16.81■□□□□ 0.28
SREBF2Q12772 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.81■□□□□ 0.28
SREBF2Q12772 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 AL118522.1-201ENST00000611368 560 ntBASIC16.81■□□□□ 0.28
SREBF2Q12772 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SREBF2Q12772 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.81■□□□□ 0.28
SREBF2Q12772 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 AL662844.4-201ENST00000606367 2838 ntBASIC16.81■□□□□ 0.28
SREBF2Q12772 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SREBF2Q12772 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.81■□□□□ 0.28
SREBF2Q12772 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.8■□□□□ 0.28
SREBF2Q12772 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SREBF2Q12772 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SREBF2Q12772 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.8■□□□□ 0.28
SREBF2Q12772 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.8■□□□□ 0.28
SREBF2Q12772 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SREBF2Q12772 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SREBF2Q12772 KRT8P28-201ENST00000433288 1390 ntBASIC16.8■□□□□ 0.28
SREBF2Q12772 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SREBF2Q12772 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SREBF2Q12772 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SREBF2Q12772 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.8■□□□□ 0.28
SREBF2Q12772 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SREBF2Q12772 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SREBF2Q12772 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SREBF2Q12772 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.8■□□□□ 0.28
SREBF2Q12772 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.8■□□□□ 0.28
SREBF2Q12772 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.8■□□□□ 0.28
SREBF2Q12772 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SREBF2Q12772 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.8■□□□□ 0.28
SREBF2Q12772 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SREBF2Q12772 HLA-DPA2-205ENST00000433582 733 ntBASIC16.8■□□□□ 0.28
SREBF2Q12772 VENTXP4-201ENST00000449029 958 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms