Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 AC027601.5-201ENST00000624065 2482 ntBASIC12.61□□□□□ -0.39
HLA-DRB3P79483 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 MIR943-201ENST00000401286 94 ntBASIC12.61□□□□□ -0.39
HLA-DRB3P79483 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 AC093028.1-201ENST00000622998 982 ntBASIC12.61□□□□□ -0.39
HLA-DRB3P79483 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 DRD5P1-201ENST00000456605 1438 ntBASIC12.61□□□□□ -0.39
HLA-DRB3P79483 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB3P79483 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 TSSK5P-201ENST00000423978 907 ntBASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AL589987.1-201ENST00000453380 819 ntBASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 FAM86LP-201ENST00000478302 853 ntBASIC12.6□□□□□ -0.39
HLA-DRB3P79483 SPDYE18-201ENST00000510091 1050 ntBASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AL049840.4-201ENST00000602422 811 ntBASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AL691403.2-201ENST00000618460 490 ntBASIC12.6□□□□□ -0.39
HLA-DRB3P79483 AC023090.2-201ENST00000625182 2110 ntBASIC12.6□□□□□ -0.39
HLA-DRB3P79483 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB3P79483 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms