Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 KRT18P64-201ENST00000434946 1219 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 SPDYE14P-201ENST00000442619 822 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.3□□□□□ -0.44
SPCS3P61009 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.3□□□□□ -0.44
SPCS3P61009 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.3□□□□□ -0.44
SPCS3P61009 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 AC026150.2-201ENST00000564693 1156 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.3□□□□□ -0.44
SPCS3P61009 AC025048.3-201ENST00000590609 569 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 AC005702.4-201ENST00000618393 416 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 LINC00628-201ENST00000628516 1289 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
SPCS3P61009 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 BX324167.2-201ENST00000623717 3316 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
SPCS3P61009 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 AC015802.1-201ENST00000588104 1449 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.29□□□□□ -0.44
SPCS3P61009 AC092117.1-201ENST00000621230 3250 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.29□□□□□ -0.44
SPCS3P61009 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 AL121723.1-201ENST00000445194 1519 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 TOMM22P5-201ENST00000416399 439 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 SPDYE7P-202ENST00000420373 878 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 GPS2P2-201ENST00000430745 888 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 RPL13P2-201ENST00000440687 659 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.29□□□□□ -0.44
SPCS3P61009 PGAM5P1-201ENST00000518923 814 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.29□□□□□ -0.44
SPCS3P61009 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 MIR4453-201ENST00000584019 89 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
SPCS3P61009 AC136759.1-202ENST00000530858 2194 ntBASIC12.29□□□□□ -0.44
SPCS3P61009 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms