Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.46■□□□□ 0.39
RHBDL3P58872 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.46■□□□□ 0.39
RHBDL3P58872 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 AC023157.3-201ENST00000619086 2088 ntBASIC17.46■□□□□ 0.39
RHBDL3P58872 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.46■□□□□ 0.39
RHBDL3P58872 C8orf49-201ENST00000525043 1968 ntBASIC17.46■□□□□ 0.39
RHBDL3P58872 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RHBDL3P58872 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 AC126177.1-201ENST00000547829 2218 ntBASIC17.46■□□□□ 0.39
RHBDL3P58872 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RHBDL3P58872 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.46■□□□□ 0.39
RHBDL3P58872 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.46■□□□□ 0.39
RHBDL3P58872 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 RN7SL258P-201ENST00000478664 300 ntBASIC17.46■□□□□ 0.39
RHBDL3P58872 POU5F1P2-201ENST00000521750 823 ntBASIC17.46■□□□□ 0.39
RHBDL3P58872 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.46■□□□□ 0.39
RHBDL3P58872 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.46■□□□□ 0.39
RHBDL3P58872 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.46■□□□□ 0.39
RHBDL3P58872 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RHBDL3P58872 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.46■□□□□ 0.39
RHBDL3P58872 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 AL109837.1-201ENST00000603272 613 ntBASIC17.46■□□□□ 0.39
RHBDL3P58872 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.46■□□□□ 0.39
RHBDL3P58872 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RHBDL3P58872 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RHBDL3P58872 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.46■□□□□ 0.39
RHBDL3P58872 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHBDL3P58872 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RHBDL3P58872 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RHBDL3P58872 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.38
RHBDL3P58872 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RHBDL3P58872 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RHBDL3P58872 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RHBDL3P58872 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.45■□□□□ 0.38
RHBDL3P58872 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RHBDL3P58872 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.45■□□□□ 0.38
RHBDL3P58872 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.45■□□□□ 0.38
RHBDL3P58872 FTLP1-201ENST00000449155 526 ntBASIC17.45■□□□□ 0.38
RHBDL3P58872 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.45■□□□□ 0.38
RHBDL3P58872 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 AC018635.2-201ENST00000608625 364 ntBASIC17.45■□□□□ 0.38
RHBDL3P58872 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RHBDL3P58872 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RHBDL3P58872 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.45■□□□□ 0.38
RHBDL3P58872 TBC1D3J-201ENST00000620719 1426 ntBASIC17.45■□□□□ 0.38
RHBDL3P58872 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.45■□□□□ 0.38
RHBDL3P58872 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDL3P58872 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RHBDL3P58872 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.44■□□□□ 0.38
RHBDL3P58872 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDL3P58872 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDL3P58872 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.44■□□□□ 0.38
RHBDL3P58872 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.44■□□□□ 0.38
RHBDL3P58872 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RHBDL3P58872 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDL3P58872 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RHBDL3P58872 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDL3P58872 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.44■□□□□ 0.38
RHBDL3P58872 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDL3P58872 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RHBDL3P58872 AC015909.3-201ENST00000572855 1794 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms