Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLDN6P56747 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 AC026316.1-201ENST00000398900 414 ntBASIC14.35□□□□□ -0.11
CLDN6P56747 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 RPSAP31-201ENST00000416648 895 ntBASIC14.35□□□□□ -0.11
CLDN6P56747 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN6P56747 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 AC009779.1-201ENST00000551138 283 ntBASIC14.35□□□□□ -0.11
CLDN6P56747 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLDN6P56747 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN6P56747 AL109837.1-201ENST00000603272 613 ntBASIC14.35□□□□□ -0.11
CLDN6P56747 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 YRDCP1-201ENST00000621419 643 ntBASIC14.35□□□□□ -0.11
CLDN6P56747 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN6P56747 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN6P56747 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN6P56747 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN6P56747 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLDN6P56747 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN6P56747 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN6P56747 AL627231.1-201ENST00000394467 1125 ntBASIC14.34□□□□□ -0.11
CLDN6P56747 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN6P56747 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 HLA-J-204ENST00000495278 958 ntBASIC14.34□□□□□ -0.11
CLDN6P56747 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN6P56747 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CLDN6P56747 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN6P56747 AL132994.2-201ENST00000603120 687 ntBASIC14.34□□□□□ -0.11
CLDN6P56747 AP001065.2-201ENST00000617205 644 ntBASIC14.34□□□□□ -0.11
CLDN6P56747 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 AL513477.1-201ENST00000602865 2407 ntBASIC14.34□□□□□ -0.11
CLDN6P56747 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.34□□□□□ -0.11
CLDN6P56747 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN6P56747 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLDN6P56747 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN6P56747 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN6P56747 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms