Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.76■□□□□ 0.59
KCNQ4P56696 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNQ4P56696 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNQ4P56696 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KCNQ4P56696 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.75■□□□□ 0.59
KCNQ4P56696 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
KCNQ4P56696 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
KCNQ4P56696 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNQ4P56696 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.75■□□□□ 0.59
KCNQ4P56696 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.75■□□□□ 0.59
KCNQ4P56696 RN7SL530P-201ENST00000485097 298 ntBASIC18.75■□□□□ 0.59
KCNQ4P56696 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.75■□□□□ 0.59
KCNQ4P56696 AC027139.1-201ENST00000565286 951 ntBASIC18.75■□□□□ 0.59
KCNQ4P56696 AC055811.3-201ENST00000584952 686 ntBASIC18.75■□□□□ 0.59
KCNQ4P56696 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNQ4P56696 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNQ4P56696 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNQ4P56696 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNQ4P56696 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNQ4P56696 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
KCNQ4P56696 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNQ4P56696 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNQ4P56696 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
KCNQ4P56696 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNQ4P56696 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 COX20P1-201ENST00000366529 357 ntBASIC18.74■□□□□ 0.59
KCNQ4P56696 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
KCNQ4P56696 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNQ4P56696 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNQ4P56696 BCAS2P2-201ENST00000425064 674 ntBASIC18.74■□□□□ 0.59
KCNQ4P56696 GCSHP3-201ENST00000431120 391 ntBASIC18.74■□□□□ 0.59
KCNQ4P56696 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 RN7SL277P-201ENST00000481521 288 ntBASIC18.74■□□□□ 0.59
KCNQ4P56696 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 FAM86B3P-203ENST00000523992 854 ntBASIC18.74■□□□□ 0.59
KCNQ4P56696 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 AC068867.1-201ENST00000559855 150 ntBASIC18.74■□□□□ 0.59
KCNQ4P56696 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.74■□□□□ 0.59
KCNQ4P56696 AP000322.3-201ENST00000608665 388 ntBASIC18.74■□□□□ 0.59
KCNQ4P56696 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNQ4P56696 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNQ4P56696 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNQ4P56696 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
KCNQ4P56696 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNQ4P56696 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNQ4P56696 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNQ4P56696 AC108734.2-201ENST00000420887 1069 ntBASIC18.73■□□□□ 0.59
KCNQ4P56696 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.73■□□□□ 0.59
KCNQ4P56696 AC138701.2-201ENST00000553634 226 ntBASIC18.73■□□□□ 0.59
KCNQ4P56696 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNQ4P56696 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.73■□□□□ 0.59
KCNQ4P56696 HMGB1P24-201ENST00000611897 328 ntBASIC18.73■□□□□ 0.59
KCNQ4P56696 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNQ4P56696 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.73■□□□□ 0.59
KCNQ4P56696 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNQ4P56696 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms