Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.47■□□□□ 0.23
PMS1P54277 PIN1P1-201ENST00000412108 996 ntBASIC16.47■□□□□ 0.23
PMS1P54277 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.47■□□□□ 0.23
PMS1P54277 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.47■□□□□ 0.23
PMS1P54277 TP53TG3HP-202ENST00000569755 579 ntBASIC16.47■□□□□ 0.23
PMS1P54277 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.47■□□□□ 0.23
PMS1P54277 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PMS1P54277 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PMS1P54277 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.47■□□□□ 0.23
PMS1P54277 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PMS1P54277 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PMS1P54277 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 AC007969.1-201ENST00000433675 447 ntBASIC16.46■□□□□ 0.23
PMS1P54277 AL162726.2-201ENST00000438986 1017 ntBASIC16.46■□□□□ 0.23
PMS1P54277 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PMS1P54277 AL355385.1-201ENST00000606123 409 ntBASIC16.46■□□□□ 0.23
PMS1P54277 AL603764.1-201ENST00000636452 321 ntBASIC16.46■□□□□ 0.23
PMS1P54277 AL033527.5-201ENST00000641382 801 ntBASIC16.46■□□□□ 0.23
PMS1P54277 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PMS1P54277 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PMS1P54277 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.46■□□□□ 0.23
PMS1P54277 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PMS1P54277 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PMS1P54277 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PMS1P54277 AC020910.5-201ENST00000623668 1865 ntBASIC16.46■□□□□ 0.22
PMS1P54277 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.46■□□□□ 0.22
PMS1P54277 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PMS1P54277 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.46■□□□□ 0.22
PMS1P54277 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PMS1P54277 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 AL138725.1-201ENST00000407347 1314 ntBASIC16.45■□□□□ 0.22
PMS1P54277 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PMS1P54277 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PMS1P54277 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PMS1P54277 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 CICP16-201ENST00000502609 2813 ntBASIC16.45■□□□□ 0.22
PMS1P54277 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PMS1P54277 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.45■□□□□ 0.22
PMS1P54277 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.45■□□□□ 0.22
PMS1P54277 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.45■□□□□ 0.22
PMS1P54277 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.45■□□□□ 0.22
PMS1P54277 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms