Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.03□□□□□ -0.16
RNF144AP50876 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RNF144AP50876 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RNF144AP50876 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RNF144AP50876 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RNF144AP50876 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.02□□□□□ -0.16
RNF144AP50876 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.02□□□□□ -0.16
RNF144AP50876 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RNF144AP50876 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RNF144AP50876 AC093525.8-201ENST00000624099 1342 ntBASIC14.02□□□□□ -0.17
RNF144AP50876 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.02□□□□□ -0.17
RNF144AP50876 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RNF144AP50876 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 AC104457.1-201ENST00000401024 814 ntBASIC14.02□□□□□ -0.17
RNF144AP50876 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.02□□□□□ -0.17
RNF144AP50876 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.02□□□□□ -0.17
RNF144AP50876 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.02□□□□□ -0.17
RNF144AP50876 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.02□□□□□ -0.17
RNF144AP50876 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.02□□□□□ -0.17
RNF144AP50876 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 AC140912.1-201ENST00000577171 1054 ntBASIC14.02□□□□□ -0.17
RNF144AP50876 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.02□□□□□ -0.17
RNF144AP50876 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.02□□□□□ -0.17
RNF144AP50876 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RNF144AP50876 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RNF144AP50876 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.02□□□□□ -0.17
RNF144AP50876 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.02□□□□□ -0.17
RNF144AP50876 AC140479.7-201ENST00000636301 2332 ntBASIC14.02□□□□□ -0.17
RNF144AP50876 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF144AP50876 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.02□□□□□ -0.17
RNF144AP50876 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
RNF144AP50876 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
RNF144AP50876 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RNF144AP50876 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 PIN1P1-201ENST00000412108 996 ntBASIC14.01□□□□□ -0.17
RNF144AP50876 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.01□□□□□ -0.17
RNF144AP50876 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.01□□□□□ -0.17
RNF144AP50876 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RNF144AP50876 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms