Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CEACAM3P40198 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.29□□□□□ -0.44
CEACAM3P40198 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CEACAM3P40198 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 BOLA2P3-201ENST00000404566 256 ntBASIC12.29□□□□□ -0.44
CEACAM3P40198 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.29□□□□□ -0.44
CEACAM3P40198 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.29□□□□□ -0.44
CEACAM3P40198 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CEACAM3P40198 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.29□□□□□ -0.44
CEACAM3P40198 AC008735.3-201ENST00000596646 500 ntBASIC12.29□□□□□ -0.44
CEACAM3P40198 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 DMBT1P1-203ENST00000636837 4628 ntBASIC12.29□□□□□ -0.44
CEACAM3P40198 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CEACAM3P40198 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CEACAM3P40198 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CEACAM3P40198 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 AL137783.1-201ENST00000623494 1896 ntBASIC12.29□□□□□ -0.44
CEACAM3P40198 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 AL157414.3-201ENST00000624276 1954 ntBASIC12.29□□□□□ -0.44
CEACAM3P40198 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CEACAM3P40198 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.28□□□□□ -0.44
CEACAM3P40198 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CEACAM3P40198 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CEACAM3P40198 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.28□□□□□ -0.44
CEACAM3P40198 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 AP001889.1-201ENST00000525414 633 ntBASIC12.28□□□□□ -0.44
CEACAM3P40198 DUX4L47-201ENST00000566374 394 ntBASIC12.28□□□□□ -0.44
CEACAM3P40198 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.28□□□□□ -0.44
CEACAM3P40198 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 RN7SL48P-201ENST00000579283 293 ntBASIC12.28□□□□□ -0.44
CEACAM3P40198 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CEACAM3P40198 IGHV3-72-202ENST00000621503 303 ntBASIC12.28□□□□□ -0.44
CEACAM3P40198 AC132938.4-201ENST00000623835 848 ntBASIC12.28□□□□□ -0.44
CEACAM3P40198 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.28□□□□□ -0.44
CEACAM3P40198 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.28□□□□□ -0.44
CEACAM3P40198 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.28□□□□□ -0.44
CEACAM3P40198 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.28□□□□□ -0.44
CEACAM3P40198 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms