Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.57■□□□□ 0.56
RFC4P35249 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.57■□□□□ 0.56
RFC4P35249 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 AL513523.2-202ENST00000427283 2040 ntBASIC18.56■□□□□ 0.56
RFC4P35249 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.56■□□□□ 0.56
RFC4P35249 HLA-DMA-203ENST00000395305 777 ntBASIC18.56■□□□□ 0.56
RFC4P35249 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.56■□□□□ 0.56
RFC4P35249 RN7SL530P-201ENST00000485097 298 ntBASIC18.56■□□□□ 0.56
RFC4P35249 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RFC4P35249 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC4P35249 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.56■□□□□ 0.56
RFC4P35249 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFC4P35249 FO393412.1-201ENST00000619841 382 ntBASIC18.56■□□□□ 0.56
RFC4P35249 LINC00431-202ENST00000636375 159 ntBASIC18.56■□□□□ 0.56
RFC4P35249 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.56■□□□□ 0.56
RFC4P35249 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 IL9RP3-201ENST00000442856 1674 ntBASIC18.56■□□□□ 0.56
RFC4P35249 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC4P35249 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC4P35249 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RFC4P35249 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
RFC4P35249 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RFC4P35249 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 OR2R1P-201ENST00000441404 914 ntBASIC18.55■□□□□ 0.56
RFC4P35249 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.55■□□□□ 0.56
RFC4P35249 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 AP000911.2-201ENST00000534330 502 ntBASIC18.55■□□□□ 0.56
RFC4P35249 AC003686.1-201ENST00000550956 1034 ntBASIC18.55■□□□□ 0.56
RFC4P35249 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.55■□□□□ 0.56
RFC4P35249 MIR5196-201ENST00000578146 115 ntBASIC18.55■□□□□ 0.56
RFC4P35249 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RFC4P35249 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC4P35249 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RFC4P35249 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.55■□□□□ 0.56
RFC4P35249 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.55■□□□□ 0.56
RFC4P35249 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFC4P35249 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RFC4P35249 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
RFC4P35249 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC4P35249 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
RFC4P35249 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.55■□□□□ 0.56
RFC4P35249 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC4P35249 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.54■□□□□ 0.56
RFC4P35249 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC4P35249 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC4P35249 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms