Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.35■□□□□ 0.21
RFX1P22670 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.35■□□□□ 0.21
RFX1P22670 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 AL139099.5-201ENST00000635274 300 ntBASIC16.35■□□□□ 0.21
RFX1P22670 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RFX1P22670 AL137783.1-201ENST00000623494 1896 ntBASIC16.35■□□□□ 0.21
RFX1P22670 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX1P22670 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 AC007191.1-201ENST00000623179 2995 ntBASIC16.35■□□□□ 0.21
RFX1P22670 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RFX1P22670 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RFX1P22670 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX1P22670 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RFX1P22670 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RFX1P22670 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.34■□□□□ 0.21
RFX1P22670 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX1P22670 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 AC018529.2-202ENST00000611482 3087 ntBASIC16.34■□□□□ 0.21
RFX1P22670 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 C1QBPP1-201ENST00000400117 770 ntBASIC16.34■□□□□ 0.21
RFX1P22670 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.34■□□□□ 0.21
RFX1P22670 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RFX1P22670 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.34■□□□□ 0.21
RFX1P22670 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RFX1P22670 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.34■□□□□ 0.21
RFX1P22670 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.34■□□□□ 0.21
RFX1P22670 AL359711.2-201ENST00000563105 872 ntBASIC16.34■□□□□ 0.21
RFX1P22670 DUX4L47-201ENST00000566374 394 ntBASIC16.34■□□□□ 0.21
RFX1P22670 AC124283.3-201ENST00000570869 594 ntBASIC16.34■□□□□ 0.21
RFX1P22670 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX1P22670 AC009542.2-202ENST00000619004 1067 ntBASIC16.34■□□□□ 0.21
RFX1P22670 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RFX1P22670 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX1P22670 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RFX1P22670 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RFX1P22670 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFX1P22670 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX1P22670 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX1P22670 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.34■□□□□ 0.21
RFX1P22670 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RFX1P22670 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFX1P22670 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.33■□□□□ 0.21
RFX1P22670 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.33■□□□□ 0.21
RFX1P22670 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFX1P22670 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RFX1P22670 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFX1P22670 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.33■□□□□ 0.2
RFX1P22670 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.33■□□□□ 0.2
RFX1P22670 MTHFR-210ENST00000641407 2387 ntBASIC16.33■□□□□ 0.2
RFX1P22670 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 GPAA1P2-201ENST00000417923 928 ntBASIC16.33■□□□□ 0.2
RFX1P22670 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.33■□□□□ 0.2
RFX1P22670 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.33■□□□□ 0.2
RFX1P22670 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 ENPP7P5-201ENST00000541031 1031 ntBASIC16.33■□□□□ 0.2
RFX1P22670 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.33■□□□□ 0.2
RFX1P22670 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.33■□□□□ 0.2
RFX1P22670 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RFX1P22670 AC009486.1-201ENST00000569860 813 ntBASIC16.33■□□□□ 0.2
RFX1P22670 RN7SL560P-201ENST00000577943 264 ntBASIC16.33■□□□□ 0.2
RFX1P22670 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.33■□□□□ 0.2
RFX1P22670 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.33■□□□□ 0.2
RFX1P22670 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RFX1P22670 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFX1P22670 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms