Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 GIMAP3P-201ENST00000495150 836 ntBASIC14.49□□□□□ -0.09
CAPN3P20807 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CAPN3P20807 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN3P20807 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 MIR6805-201ENST00000615055 62 ntBASIC14.49□□□□□ -0.09
CAPN3P20807 AL162274.1-201ENST00000617191 1098 ntBASIC14.49□□□□□ -0.09
CAPN3P20807 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN3P20807 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN3P20807 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN3P20807 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 AL359881.3-201ENST00000602640 1721 ntBASIC14.49□□□□□ -0.09
CAPN3P20807 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN3P20807 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CAPN3P20807 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 AC089987.1-201ENST00000551654 2209 ntBASIC14.48□□□□□ -0.09
CAPN3P20807 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
CAPN3P20807 AC011495.1-201ENST00000498085 584 ntBASIC14.48□□□□□ -0.09
CAPN3P20807 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.48□□□□□ -0.09
CAPN3P20807 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.48□□□□□ -0.09
CAPN3P20807 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CAPN3P20807 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.48□□□□□ -0.09
CAPN3P20807 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 TEX28P1-201ENST00000613479 1221 ntBASIC14.48□□□□□ -0.09
CAPN3P20807 TEX28P2-201ENST00000617764 1221 ntBASIC14.48□□□□□ -0.09
CAPN3P20807 SPDYE12P-201ENST00000618416 771 ntBASIC14.48□□□□□ -0.09
CAPN3P20807 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN3P20807 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN3P20807 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN3P20807 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CAPN3P20807 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CAPN3P20807 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CAPN3P20807 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms