Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC134312.5-201ENST00000568031 1313 ntBASIC13.46□□□□□ -0.25
HLA-DOBP13765 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DOBP13765 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DOBP13765 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
HLA-DOBP13765 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DOBP13765 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DOBP13765 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DOBP13765 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DOBP13765 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 BAATP1-201ENST00000412284 1225 ntBASIC13.45□□□□□ -0.26
HLA-DOBP13765 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AC012441.1-201ENST00000446669 685 ntBASIC13.45□□□□□ -0.26
HLA-DOBP13765 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 RN7SL692P-201ENST00000464677 288 ntBASIC13.45□□□□□ -0.26
HLA-DOBP13765 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 MIR3197-201ENST00000582241 73 ntBASIC13.45□□□□□ -0.26
HLA-DOBP13765 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AC145423.3-201ENST00000615987 467 ntBASIC13.45□□□□□ -0.26
HLA-DOBP13765 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DOBP13765 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DOBP13765 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms